STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN37529.1Hypothetical protein. (221 aa)    
Predicted Functional Partners:
SHN25216.1
Signal transduction histidine kinase.
    
 0.825
truA
tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
    0.491
SHL23910.1
Hypothetical protein.
    
   0.438
SHL25334.1
Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin.
    
   0.438
SHL30728.1
LPXTG-motif cell wall anchor domain-containing protein.
    
   0.438
SHL30779.1
Small secreted domain.
    
   0.438
SHL31214.1
Glycosyl hydrolase family 26; Belongs to the glycosyl hydrolase 26 family.
    
   0.438
SHL31346.1
Small secreted domain.
    
   0.438
SHL19464.1
Conserved repeat domain-containing protein.
    
   0.438
SHL20789.1
alpha-L-fucosidase 2.
    
   0.438
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.