Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK75042.1 | SHK78179.1 | SAMN05216499_101546 | SAMN05216499_101621 | Transcriptional regulator, TetR family. | P-aminobenzoate N-oxygenase AurF. | 0.526 |
SHK75042.1 | SHM54915.1 | SAMN05216499_101546 | SAMN05216499_1125 | Transcriptional regulator, TetR family. | TIGR03084 family protein. | 0.480 |
SHK75042.1 | SHN38212.1 | SAMN05216499_101546 | SAMN05216499_1624 | Transcriptional regulator, TetR family. | Polyketide cyclase / dehydrase and lipid transport. | 0.427 |
SHK78179.1 | SHK75042.1 | SAMN05216499_101621 | SAMN05216499_101546 | P-aminobenzoate N-oxygenase AurF. | Transcriptional regulator, TetR family. | 0.526 |
SHK78179.1 | SHM54915.1 | SAMN05216499_101621 | SAMN05216499_1125 | P-aminobenzoate N-oxygenase AurF. | TIGR03084 family protein. | 0.559 |
SHK78179.1 | SHN01314.1 | SAMN05216499_101621 | SAMN05216499_11853 | P-aminobenzoate N-oxygenase AurF. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.881 |
SHK78179.1 | SHN34149.1 | SAMN05216499_101621 | SAMN05216499_14046 | P-aminobenzoate N-oxygenase AurF. | Ferredoxin-NADP reductase. | 0.874 |
SHK78179.1 | SHN38212.1 | SAMN05216499_101621 | SAMN05216499_1624 | P-aminobenzoate N-oxygenase AurF. | Polyketide cyclase / dehydrase and lipid transport. | 0.557 |
SHL77081.1 | SHL77111.1 | SAMN05216499_10629 | SAMN05216499_10630 | NAD(P)H-flavin reductase; Belongs to the globin family. | Hemoglobin-like flavoprotein; Belongs to the globin family. | 0.712 |
SHL77081.1 | SHN01314.1 | SAMN05216499_10629 | SAMN05216499_11853 | NAD(P)H-flavin reductase; Belongs to the globin family. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.943 |
SHL77081.1 | SHN34149.1 | SAMN05216499_10629 | SAMN05216499_14046 | NAD(P)H-flavin reductase; Belongs to the globin family. | Ferredoxin-NADP reductase. | 0.959 |
SHL77081.1 | SHN38212.1 | SAMN05216499_10629 | SAMN05216499_1624 | NAD(P)H-flavin reductase; Belongs to the globin family. | Polyketide cyclase / dehydrase and lipid transport. | 0.877 |
SHL77111.1 | SHL77081.1 | SAMN05216499_10630 | SAMN05216499_10629 | Hemoglobin-like flavoprotein; Belongs to the globin family. | NAD(P)H-flavin reductase; Belongs to the globin family. | 0.712 |
SHL77111.1 | SHN01314.1 | SAMN05216499_10630 | SAMN05216499_11853 | Hemoglobin-like flavoprotein; Belongs to the globin family. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.929 |
SHL77111.1 | SHN34149.1 | SAMN05216499_10630 | SAMN05216499_14046 | Hemoglobin-like flavoprotein; Belongs to the globin family. | Ferredoxin-NADP reductase. | 0.970 |
SHL77111.1 | SHN38212.1 | SAMN05216499_10630 | SAMN05216499_1624 | Hemoglobin-like flavoprotein; Belongs to the globin family. | Polyketide cyclase / dehydrase and lipid transport. | 0.877 |
SHM54915.1 | SHK75042.1 | SAMN05216499_1125 | SAMN05216499_101546 | TIGR03084 family protein. | Transcriptional regulator, TetR family. | 0.480 |
SHM54915.1 | SHK78179.1 | SAMN05216499_1125 | SAMN05216499_101621 | TIGR03084 family protein. | P-aminobenzoate N-oxygenase AurF. | 0.559 |
SHM54915.1 | SHN38212.1 | SAMN05216499_1125 | SAMN05216499_1624 | TIGR03084 family protein. | Polyketide cyclase / dehydrase and lipid transport. | 0.536 |
SHN01314.1 | SHK78179.1 | SAMN05216499_11853 | SAMN05216499_101621 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | P-aminobenzoate N-oxygenase AurF. | 0.881 |
page 1 of 3