STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN38212.1Polyketide cyclase / dehydrase and lipid transport. (150 aa)    
Predicted Functional Partners:
SHL77081.1
NAD(P)H-flavin reductase; Belongs to the globin family.
  
  
 0.877
SHL77111.1
Hemoglobin-like flavoprotein; Belongs to the globin family.
  
  
 0.877
SHN38217.1
Hypothetical protein.
       0.773
SHN38222.1
Hypothetical protein.
       0.658
SHN34149.1
Ferredoxin-NADP reductase.
  
  
 0.574
SHN01314.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
  
 0.570
SHK78179.1
P-aminobenzoate N-oxygenase AurF.
  
     0.557
SHM54915.1
TIGR03084 family protein.
  
     0.536
SHK75042.1
Transcriptional regulator, TetR family.
  
     0.427
SHN38205.1
Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains.
       0.425
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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