STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS91724.1Protein of unknown function. (175 aa)    
Predicted Functional Partners:
SFT12338.1
C-type cytochrome, methanol metabolism-related.
 
     0.747
SFT12346.1
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-).
 
     0.742
SFT12357.1
PQQ-dependent catabolism-associated CXXCW motif protein.
  
     0.728
SFT12514.1
Hypothetical protein.
  
     0.719
SFS79444.1
Sulfur-oxidizing protein SoxY.
 
     0.713
SFS79409.1
Hypothetical protein.
 
     0.699
SFS83955.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.696
SFS79429.1
Quinoprotein relay system zinc metallohydrolase 2.
 
     0.659
SFS83916.1
Protoporphyrinogen oxidase.
  
     0.628
SFT12327.1
PQQ-dependent dehydrogenase, methanol/ethanol family.
  
     0.612
Your Current Organism:
Yangia pacifica
NCBI taxonomy Id: 311180
Other names: CGMCC 1.3455, DSM 26894, JCM 12573, Y. pacifica, Yangia pacifica Dai et al. 2006, alpha proteobacterium DX5-10, strain DX5-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.