STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS97025.1Hypothetical protein. (200 aa)    
Predicted Functional Partners:
SFS96985.1
N-terminal double-transmembrane domain-containing protein.
 
     0.888
SFS96996.1
Protein of unknown function DUF58.
 
     0.843
SFS96970.1
Putative glutamine amidotransferase.
 
     0.833
SFS97013.1
MoxR-like ATPase.
 
     0.691
SFS95493.1
8-oxo-dGTP pyrophosphatase MutT, NUDIX family.
      0.621
SFT25694.1
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
 
     0.486
SFS76455.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
 
     0.485
SFT11316.1
TIGR02302 family protein.
  
     0.435
SFS40578.1
Uncharacterized domain 1-containing protein.
 
     0.414
SFS88006.1
Uncharacterized protein, UPF0262 family; Belongs to the UPF0262 family.
  
     0.407
Your Current Organism:
Yangia pacifica
NCBI taxonomy Id: 311180
Other names: CGMCC 1.3455, DSM 26894, JCM 12573, Y. pacifica, Yangia pacifica Dai et al. 2006, alpha proteobacterium DX5-10, strain DX5-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.