STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT03042.1MFS transporter, DHA2 family, lincomycin resistance protein; Belongs to the major facilitator superfamily. (490 aa)    
Predicted Functional Partners:
SFS39594.1
Multidrug resistance efflux pump.
 
 0.597
SFS66671.1
Membrane fusion protein, multidrug efflux system.
 
 
 0.527
SFS67603.1
MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein.
 
   
 0.489
SFT03028.1
Alcohol dehydrogenase, propanol-preferring.
       0.483
SFS63397.1
MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein.
 
   
 0.480
SFT25765.1
Multidrug resistance efflux pump.
  
 
 0.462
SFS44478.1
MFS transporter, DHA1 family, arabinose polymer transporter.
 
   
 0.412
SFT03054.1
Transcriptional regulator, GntR family.
       0.411
Your Current Organism:
Yangia pacifica
NCBI taxonomy Id: 311180
Other names: CGMCC 1.3455, DSM 26894, JCM 12573, Y. pacifica, Yangia pacifica Dai et al. 2006, alpha proteobacterium DX5-10, strain DX5-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.