STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT12637.1Branched-chain amino acid transport system substrate-binding protein. (388 aa)    
Predicted Functional Partners:
SFT12619.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.993
SFT12628.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.993
SFT12608.1
Branched-chain amino acid transport system ATP-binding protein.
 
  
 0.935
SFT12599.1
Branched-chain amino acid transport system ATP-binding protein.
 
  
 0.913
SFT22947.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-); Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.877
SFS31439.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-)/amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.821
SFS97404.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.789
SFS97420.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.774
SFS97434.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
  
 0.751
SFT12588.1
Cytochrome P450.
 
     0.669
Your Current Organism:
Yangia pacifica
NCBI taxonomy Id: 311180
Other names: CGMCC 1.3455, DSM 26894, JCM 12573, Y. pacifica, Yangia pacifica Dai et al. 2006, alpha proteobacterium DX5-10, strain DX5-10
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