STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT20916.1Transposase. (437 aa)    
Predicted Functional Partners:
SFT26560.1
Transposase.
  
     0.722
SFS65552.1
Transposase IS116/IS110/IS902 family protein.
  
     0.714
SFT25934.1
Transposase.
  
     0.713
SFT26306.1
Transposase.
  
     0.713
SFS65581.1
Transposase.
  
     0.672
SFS80384.1
Hypothetical protein.
  
     0.653
SFT20922.1
Transposase, Mutator family.
       0.518
SFT27576.1
DNA replication protein DnaC.
 
     0.457
SFT25303.1
DNA replication protein DnaC.
 
     0.438
SFS65566.1
Transposase.
  
     0.426
Your Current Organism:
Yangia pacifica
NCBI taxonomy Id: 311180
Other names: CGMCC 1.3455, DSM 26894, JCM 12573, Y. pacifica, Yangia pacifica Dai et al. 2006, alpha proteobacterium DX5-10, strain DX5-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.