STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT23823.1Alcohol dehydrogenase, class IV. (372 aa)    
Predicted Functional Partners:
SFS96226.1
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase).
    
 0.873
SFT23831.1
Uncharacterized conserved protein YgbK, DUF1537 family.
 
     0.845
SFT23840.1
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.
 
     0.732
SFS35719.1
Alcohol dehydrogenase.
  
 
 0.710
SFT03028.1
Alcohol dehydrogenase, propanol-preferring.
  
 
 0.710
SFS79388.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
  
 
 0.678
SFS92477.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 
 0.678
SFT24602.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
  
 
 0.678
glgA
Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.664
SFT20199.1
Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family.
 
 0.523
Your Current Organism:
Yangia pacifica
NCBI taxonomy Id: 311180
Other names: CGMCC 1.3455, DSM 26894, JCM 12573, Y. pacifica, Yangia pacifica Dai et al. 2006, alpha proteobacterium DX5-10, strain DX5-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.