STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT26860.1Response regulator receiver protein. (266 aa)    
Predicted Functional Partners:
SFS62575.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
 
 0.998
SFS90088.1
PAS domain S-box-containing protein.
  
 
 0.988
SFT26851.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
  
 0.958
SFS82319.1
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
 
 0.952
SFT26846.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
 
   
 0.949
SFS80929.1
PAS fold-containing protein.
  
 
 0.921
SFS69568.1
PAS domain S-box-containing protein.
  
 
 0.920
SFS63598.1
Signal transduction histidine kinase.
  
 
 0.913
SFT05034.1
PAS domain S-box-containing protein.
 
 
 0.865
SFS80839.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
 
  
 0.857
Your Current Organism:
Yangia pacifica
NCBI taxonomy Id: 311180
Other names: CGMCC 1.3455, DSM 26894, JCM 12573, Y. pacifica, Yangia pacifica Dai et al. 2006, alpha proteobacterium DX5-10, strain DX5-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.