STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ31693.1Hypothetical protein. (147 aa)    
Predicted Functional Partners:
SDQ66687.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
    
 0.662
SDR04890.1
PAS domain S-box-containing protein.
    
 0.639
SDR17980.1
PAS domain-containing protein.
    
 0.639
SDQ31620.1
Ferritin; Iron-storage protein.
       0.558
SDQ97753.1
PAS domain S-box-containing protein.
     
 0.544
SDQ10005.1
Signal transduction histidine kinase.
    
 0.505
SDQ31715.1
Hypothetical protein.
       0.450
Your Current Organism:
Chryseobacterium soldanellicola
NCBI taxonomy Id: 311333
Other names: C. soldanellicola, Chryseobacterium soldanellicola Park et al. 2006, DSM 17072, KCTC 12382, NBRC 100864, strain PSD1-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.