STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ51761.1enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (255 aa)    
Predicted Functional Partners:
SDQ30462.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.997
SDR02021.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.997
SDQ10005.1
Signal transduction histidine kinase.
   
 0.956
SDQ97753.1
PAS domain S-box-containing protein.
    
 0.954
SDR14347.1
glutaryl-CoA dehydrogenase.
 
 0.949
SDR12972.1
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.939
SDR12946.1
3-hydroxyacyl-CoA dehydrogenase.
 0.937
SDQ30394.1
3-oxoadipyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.925
SDQ07295.1
Acyl-CoA dehydrogenase.
 
 0.922
SDR08204.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.920
Your Current Organism:
Chryseobacterium soldanellicola
NCBI taxonomy Id: 311333
Other names: C. soldanellicola, Chryseobacterium soldanellicola Park et al. 2006, DSM 17072, KCTC 12382, NBRC 100864, strain PSD1-4
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