STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ53390.1Por secretion system C-terminal sorting domain-containing protein. (1160 aa)    
Predicted Functional Partners:
SDQ50282.1
RHS repeat-associated core domain-containing protein.
  
     0.653
SDQ10662.1
SpoIIAA-like.
  
     0.609
SDQ15415.1
Hypothetical protein.
  
     0.553
SDQ46727.1
Hypothetical protein.
  
     0.545
SDQ07980.1
Hypothetical protein.
  
     0.523
SDQ35726.1
Methyltransferase domain-containing protein.
  
     0.519
SDR13484.1
Hypothetical protein.
  
     0.506
SDR01667.1
Hypothetical protein.
  
     0.464
SDQ05671.1
Hypothetical protein.
  
     0.459
SDQ76955.1
OmpA-OmpF porin, OOP family.
  
     0.447
Your Current Organism:
Chryseobacterium soldanellicola
NCBI taxonomy Id: 311333
Other names: C. soldanellicola, Chryseobacterium soldanellicola Park et al. 2006, DSM 17072, KCTC 12382, NBRC 100864, strain PSD1-4
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.