STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ74539.1Hypothetical protein. (267 aa)    
Predicted Functional Partners:
SDQ11767.1
Methyltransferase domain-containing protein.
  
     0.634
SDQ47735.1
Hypothetical protein.
  
     0.633
SDQ48813.1
Major paralogous domain-containing protein/Por secretion system C-terminal sorting domain-containing protein.
  
     0.629
SDQ78216.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.597
SDQ78268.1
Hypothetical protein.
 
 
   0.593
SDQ47762.1
Hypothetical protein.
  
     0.526
SDQ32131.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.517
SDQ70632.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.511
SDQ36999.1
Hypothetical protein.
  
     0.507
asnS
asparaginyl-tRNA synthetase.
       0.497
Your Current Organism:
Chryseobacterium soldanellicola
NCBI taxonomy Id: 311333
Other names: C. soldanellicola, Chryseobacterium soldanellicola Park et al. 2006, DSM 17072, KCTC 12382, NBRC 100864, strain PSD1-4
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