STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH59841.1Lysozyme. (259 aa)    
Predicted Functional Partners:
SDI19809.1
Protein TonB.
  
     0.539
trmD
tRNA (guanine37-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
       0.526
SDH59868.1
NADH dehydrogenase.
       0.524
SDH54343.1
Protein TonB.
  
     0.437
SDH54433.1
Phosphate transport system substrate-binding protein.
 
     0.414
SDH54278.1
Biopolymer transport protein ExbD.
  
     0.401
SDH54307.1
Biopolymer transport protein ExbD.
  
     0.400
Your Current Organism:
Chryseobacterium taeanense
NCBI taxonomy Id: 311334
Other names: C. taeanense, Chryseobacterium taeanense Park et al. 2006, DSM 17071, KCTC 12381, NBRC 100863, strain PHA3-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.