Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH61347.1 | SDH61369.1 | SAMN05421846_101316 | SAMN05421846_101317 | Cupin domain-containing protein. | Lysophospholipase L1. | 0.726 |
SDH61347.1 | SDH61405.1 | SAMN05421846_101316 | SAMN05421846_101318 | Cupin domain-containing protein. | Pectinesterase. | 0.705 |
SDH61347.1 | SDH61558.1 | SAMN05421846_101316 | SAMN05421846_101323 | Cupin domain-containing protein. | Unsaturated rhamnogalacturonyl hydrolase. | 0.469 |
SDH61347.1 | SDH78342.1 | SAMN05421846_101316 | SAMN05421846_10240 | Cupin domain-containing protein. | Protein N-acetyltransferase, RimJ/RimL family. | 0.569 |
SDH61347.1 | SDI22707.1 | SAMN05421846_101316 | SAMN05421846_105109 | Cupin domain-containing protein. | Regulatory protein, gntR family. | 0.523 |
SDH61347.1 | SDI77568.1 | SAMN05421846_101316 | SAMN05421846_11372 | Cupin domain-containing protein. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.491 |
SDH61347.1 | SDI86303.1 | SAMN05421846_101316 | SAMN05421846_11632 | Cupin domain-containing protein. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.524 |
SDH61347.1 | SDI91450.1 | SAMN05421846_101316 | SAMN05421846_1201 | Cupin domain-containing protein. | Phosphopantetheine attachment site. | 0.438 |
SDH61347.1 | kduI | SAMN05421846_101316 | SAMN05421846_101327 | Cupin domain-containing protein. | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.421 |
SDH61347.1 | metG | SAMN05421846_101316 | SAMN05421846_11425 | Cupin domain-containing protein. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.427 |
SDH61369.1 | SDH61347.1 | SAMN05421846_101317 | SAMN05421846_101316 | Lysophospholipase L1. | Cupin domain-containing protein. | 0.726 |
SDH61369.1 | SDH61405.1 | SAMN05421846_101317 | SAMN05421846_101318 | Lysophospholipase L1. | Pectinesterase. | 0.977 |
SDH61369.1 | SDH61558.1 | SAMN05421846_101317 | SAMN05421846_101323 | Lysophospholipase L1. | Unsaturated rhamnogalacturonyl hydrolase. | 0.857 |
SDH61405.1 | SDH61347.1 | SAMN05421846_101318 | SAMN05421846_101316 | Pectinesterase. | Cupin domain-containing protein. | 0.705 |
SDH61405.1 | SDH61369.1 | SAMN05421846_101318 | SAMN05421846_101317 | Pectinesterase. | Lysophospholipase L1. | 0.977 |
SDH61405.1 | SDH61558.1 | SAMN05421846_101318 | SAMN05421846_101323 | Pectinesterase. | Unsaturated rhamnogalacturonyl hydrolase. | 0.865 |
SDH61558.1 | SDH61347.1 | SAMN05421846_101323 | SAMN05421846_101316 | Unsaturated rhamnogalacturonyl hydrolase. | Cupin domain-containing protein. | 0.469 |
SDH61558.1 | SDH61369.1 | SAMN05421846_101323 | SAMN05421846_101317 | Unsaturated rhamnogalacturonyl hydrolase. | Lysophospholipase L1. | 0.857 |
SDH61558.1 | SDH61405.1 | SAMN05421846_101323 | SAMN05421846_101318 | Unsaturated rhamnogalacturonyl hydrolase. | Pectinesterase. | 0.865 |
SDH61558.1 | kduI | SAMN05421846_101323 | SAMN05421846_101327 | Unsaturated rhamnogalacturonyl hydrolase. | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.725 |
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