Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH64754.1 | katG | SAMN05421846_101418 | SAMN05421846_101419 | Hypothetical protein. | Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.537 |
SDH69460.1 | SDI01093.1 | SAMN05421846_101587 | SAMN05421846_103233 | Thioredoxin. | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.794 |
SDH69460.1 | SDI45917.1 | SAMN05421846_101587 | SAMN05421846_10823 | Thioredoxin. | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.794 |
SDH69460.1 | SDI86303.1 | SAMN05421846_101587 | SAMN05421846_11632 | Thioredoxin. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.693 |
SDH69460.1 | katG | SAMN05421846_101587 | SAMN05421846_101419 | Thioredoxin. | Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.572 |
SDH69460.1 | polA | SAMN05421846_101587 | SAMN05421846_11053 | Thioredoxin. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.561 |
SDI01093.1 | SDH69460.1 | SAMN05421846_103233 | SAMN05421846_101587 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Thioredoxin. | 0.794 |
SDI01093.1 | SDI34143.1 | SAMN05421846_103233 | SAMN05421846_106193 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Catalase; Belongs to the catalase family. | 0.899 |
SDI01093.1 | SDI86303.1 | SAMN05421846_103233 | SAMN05421846_11632 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.933 |
SDI01093.1 | SDI90158.1 | SAMN05421846_103233 | SAMN05421846_1191 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Superoxide dismutase, Cu-Zn family. | 0.837 |
SDI01093.1 | katG | SAMN05421846_103233 | SAMN05421846_101419 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.897 |
SDI34143.1 | SDI01093.1 | SAMN05421846_106193 | SAMN05421846_103233 | Catalase; Belongs to the catalase family. | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.899 |
SDI34143.1 | SDI42376.1 | SAMN05421846_106193 | SAMN05421846_107128 | Catalase; Belongs to the catalase family. | Gluconolactonase. | 0.513 |
SDI34143.1 | SDI45917.1 | SAMN05421846_106193 | SAMN05421846_10823 | Catalase; Belongs to the catalase family. | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.899 |
SDI34143.1 | SDI86303.1 | SAMN05421846_106193 | SAMN05421846_11632 | Catalase; Belongs to the catalase family. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.955 |
SDI34143.1 | SDI90158.1 | SAMN05421846_106193 | SAMN05421846_1191 | Catalase; Belongs to the catalase family. | Superoxide dismutase, Cu-Zn family. | 0.931 |
SDI34143.1 | katG | SAMN05421846_106193 | SAMN05421846_101419 | Catalase; Belongs to the catalase family. | Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.922 |
SDI42376.1 | SDI34143.1 | SAMN05421846_107128 | SAMN05421846_106193 | Gluconolactonase. | Catalase; Belongs to the catalase family. | 0.513 |
SDI42376.1 | SDI86303.1 | SAMN05421846_107128 | SAMN05421846_11632 | Gluconolactonase. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.709 |
SDI42376.1 | katG | SAMN05421846_107128 | SAMN05421846_101419 | Gluconolactonase. | Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.588 |
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