STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH67338.1Thioredoxin reductase. (299 aa)    
Predicted Functional Partners:
SDH69460.1
Thioredoxin.
  
 0.727
SDI75690.1
Glycine dehydrogenase; Belongs to the GcvP family.
     
 0.723
SDH67307.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
     0.600
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
 
 0.593
SDH59600.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
  
 
 0.584
SDH82961.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
  
 
 0.584
SDH69430.1
Thioredoxin 1.
  
 0.572
SDH82930.1
Thiol-disulfide isomerase or thioredoxin.
  
 0.572
SDI20318.1
Thioredoxin; Belongs to the thioredoxin family.
  
 0.572
SDI86119.1
Bacillithiol system protein YtxJ.
   
 0.531
Your Current Organism:
Chryseobacterium taeanense
NCBI taxonomy Id: 311334
Other names: C. taeanense, Chryseobacterium taeanense Park et al. 2006, DSM 17071, KCTC 12381, NBRC 100863, strain PHA3-4
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