Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH53793.1 | SDH53898.1 | SAMN05421846_10179 | SAMN05421846_10182 | Biopolymer transport protein ExbD. | Chemotaxis protein MotB. | 0.655 |
SDH53898.1 | SDH53793.1 | SAMN05421846_10182 | SAMN05421846_10179 | Chemotaxis protein MotB. | Biopolymer transport protein ExbD. | 0.655 |
SDH53898.1 | SDH54748.1 | SAMN05421846_10182 | SAMN05421846_101108 | Chemotaxis protein MotB. | Preprotein translocase subunit YajC. | 0.604 |
SDH53898.1 | SDH83966.1 | SAMN05421846_10182 | SAMN05421846_102220 | Chemotaxis protein MotB. | Signal transduction histidine kinase. | 0.896 |
SDH53898.1 | SDH84016.1 | SAMN05421846_10182 | SAMN05421846_102222 | Chemotaxis protein MotB. | Chemotaxis protein methyltransferase CheR. | 0.817 |
SDH53898.1 | SDH84044.1 | SAMN05421846_10182 | SAMN05421846_102223 | Chemotaxis protein MotB. | Two-component system, chemotaxis family, response regulator CheB. | 0.830 |
SDH53898.1 | SDH98584.1 | SAMN05421846_10182 | SAMN05421846_103134 | Chemotaxis protein MotB. | Thrombospondin type 3 repeat-containing protein. | 0.608 |
SDH53898.1 | SDI03680.1 | SAMN05421846_10182 | SAMN05421846_103322 | Chemotaxis protein MotB. | phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. | 0.794 |
SDH53898.1 | SDI20127.1 | SAMN05421846_10182 | SAMN05421846_10515 | Chemotaxis protein MotB. | Outer membrane protein OmpA. | 0.681 |
SDH53898.1 | SDI53369.1 | SAMN05421846_10182 | SAMN05421846_10954 | Chemotaxis protein MotB. | PAS domain S-box-containing protein. | 0.682 |
SDH53898.1 | SDI71379.1 | SAMN05421846_10182 | SAMN05421846_11258 | Chemotaxis protein MotB. | Peptidase family C25. | 0.734 |
SDH54748.1 | SDH53898.1 | SAMN05421846_101108 | SAMN05421846_10182 | Preprotein translocase subunit YajC. | Chemotaxis protein MotB. | 0.604 |
SDH83966.1 | SDH53898.1 | SAMN05421846_102220 | SAMN05421846_10182 | Signal transduction histidine kinase. | Chemotaxis protein MotB. | 0.896 |
SDH83966.1 | SDH84016.1 | SAMN05421846_102220 | SAMN05421846_102222 | Signal transduction histidine kinase. | Chemotaxis protein methyltransferase CheR. | 0.998 |
SDH83966.1 | SDH84044.1 | SAMN05421846_102220 | SAMN05421846_102223 | Signal transduction histidine kinase. | Two-component system, chemotaxis family, response regulator CheB. | 0.999 |
SDH83966.1 | SDH98584.1 | SAMN05421846_102220 | SAMN05421846_103134 | Signal transduction histidine kinase. | Thrombospondin type 3 repeat-containing protein. | 0.423 |
SDH83966.1 | SDI20127.1 | SAMN05421846_102220 | SAMN05421846_10515 | Signal transduction histidine kinase. | Outer membrane protein OmpA. | 0.423 |
SDH83966.1 | SDI53369.1 | SAMN05421846_102220 | SAMN05421846_10954 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SDH83966.1 | SDI71379.1 | SAMN05421846_102220 | SAMN05421846_11258 | Signal transduction histidine kinase. | Peptidase family C25. | 0.810 |
SDH84016.1 | SDH53898.1 | SAMN05421846_102222 | SAMN05421846_10182 | Chemotaxis protein methyltransferase CheR. | Chemotaxis protein MotB. | 0.817 |
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