Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH80520.1 | SDH80623.1 | SAMN05421846_102112 | SAMN05421846_102115 | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | 0.950 |
SDH80520.1 | SDH80725.1 | SAMN05421846_102112 | SAMN05421846_102118 | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | 0.924 |
SDH80520.1 | SDH80943.1 | SAMN05421846_102112 | SAMN05421846_102124 | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | alpha-N-arabinofuranosidase. | 0.630 |
SDH80520.1 | SDH81330.1 | SAMN05421846_102112 | SAMN05421846_102135 | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | Hypothetical protein. | 0.747 |
SDH80520.1 | araA | SAMN05421846_102112 | SAMN05421846_102127 | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.441 |
SDH80623.1 | SDH80520.1 | SAMN05421846_102115 | SAMN05421846_102112 | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.950 |
SDH80623.1 | SDH80725.1 | SAMN05421846_102115 | SAMN05421846_102118 | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | 0.769 |
SDH80623.1 | SDH80943.1 | SAMN05421846_102115 | SAMN05421846_102124 | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | alpha-N-arabinofuranosidase. | 0.759 |
SDH80623.1 | SDH81330.1 | SAMN05421846_102115 | SAMN05421846_102135 | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | Hypothetical protein. | 0.751 |
SDH80623.1 | araA | SAMN05421846_102115 | SAMN05421846_102127 | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.488 |
SDH80725.1 | SDH80520.1 | SAMN05421846_102118 | SAMN05421846_102112 | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.924 |
SDH80725.1 | SDH80623.1 | SAMN05421846_102118 | SAMN05421846_102115 | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | 0.769 |
SDH80725.1 | SDH80943.1 | SAMN05421846_102118 | SAMN05421846_102124 | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | alpha-N-arabinofuranosidase. | 0.917 |
SDH80725.1 | SDH81330.1 | SAMN05421846_102118 | SAMN05421846_102135 | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | Hypothetical protein. | 0.771 |
SDH80725.1 | araA | SAMN05421846_102118 | SAMN05421846_102127 | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.763 |
SDH80943.1 | SDH80520.1 | SAMN05421846_102124 | SAMN05421846_102112 | alpha-N-arabinofuranosidase. | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.630 |
SDH80943.1 | SDH80623.1 | SAMN05421846_102124 | SAMN05421846_102115 | alpha-N-arabinofuranosidase. | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | 0.759 |
SDH80943.1 | SDH80725.1 | SAMN05421846_102124 | SAMN05421846_102118 | alpha-N-arabinofuranosidase. | Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 43 family. | 0.917 |
SDH80943.1 | SDH81330.1 | SAMN05421846_102124 | SAMN05421846_102135 | alpha-N-arabinofuranosidase. | Hypothetical protein. | 0.849 |
SDH80943.1 | SDI10794.1 | SAMN05421846_102124 | SAMN05421846_10498 | alpha-N-arabinofuranosidase. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.634 |
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