STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH83398.1Glucosylceramidase; Belongs to the glycosyl hydrolase 30 family. (491 aa)    
Predicted Functional Partners:
SDH83497.1
Glucosylceramidase; Belongs to the glycosyl hydrolase 30 family.
 
  
 
0.954
SDH83337.1
Starch-binding associating with outer membrane.
 
  
  0.791
SDH83305.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.731
SDH83368.1
Hypothetical protein.
       0.718
SDI76679.1
Beta-mannosidase; Belongs to the glycosyl hydrolase 2 family.
 
  
  0.668
SDH83443.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
   
  0.664
SDH80876.1
Glucuronoarabinoxylan endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 30 family.
  
     0.662
SDH83469.1
Glycosyl hydrolases family 16.
 
   
 0.612
SDI22290.1
Beta galactosidase small chain.
    
  0.580
SDH80520.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
 
  0.439
Your Current Organism:
Chryseobacterium taeanense
NCBI taxonomy Id: 311334
Other names: C. taeanense, Chryseobacterium taeanense Park et al. 2006, DSM 17071, KCTC 12381, NBRC 100863, strain PHA3-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.