STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI23357.1Hypothetical protein. (929 aa)    
Predicted Functional Partners:
SDI23242.1
Rhs element Vgr protein.
 
 
   0.999
SDI23330.1
Baseplate J-like protein.
 
 
 
 0.992
SDI23214.1
Hypothetical protein.
 
   0.982
SDI23301.1
Hypothetical protein.
 
 
   0.973
SDI23156.1
Conserved hypothetical phage tail region protein.
 
 
 
 0.956
SDI23098.1
Hypothetical protein.
 
 
 
 0.954
SDI23126.1
Conserved hypothetical phage tail region protein.
 
 
 
 0.954
SDI23045.1
Hypothetical protein.
 
 
 
 0.953
SDI23070.1
Conserved hypothetical phage tail region protein.
 
 
 
 0.953
SDI23390.1
Hypothetical protein.
 
 
   0.953
Your Current Organism:
Chryseobacterium taeanense
NCBI taxonomy Id: 311334
Other names: C. taeanense, Chryseobacterium taeanense Park et al. 2006, DSM 17071, KCTC 12381, NBRC 100863, strain PHA3-4
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.