STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI23973.1Acyl-CoA dehydrogenase. (379 aa)    
Predicted Functional Partners:
SDH90285.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.990
SDI65466.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.989
SDI65439.1
Electron transfer flavoprotein beta subunit.
 
 0.969
SDI91450.1
Phosphopantetheine attachment site.
  
 
 0.964
SDI23939.1
Long-chain acyl-CoA synthetase.
  
 0.942
SDH90342.1
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
  0.938
SDI65656.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
  0.938
SDI34118.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  0.909
SDI71837.1
Long-chain acyl-CoA synthetase.
  
 0.904
SDH96439.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.896
Your Current Organism:
Chryseobacterium taeanense
NCBI taxonomy Id: 311334
Other names: C. taeanense, Chryseobacterium taeanense Park et al. 2006, DSM 17071, KCTC 12381, NBRC 100863, strain PHA3-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.