node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI23477.1 | SDI31527.1 | SAMN05421846_105135 | SAMN05421846_106105 | Peptidase S24-like. | DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA. | 0.707 |
SDI23477.1 | polA | SAMN05421846_105135 | SAMN05421846_11053 | Peptidase S24-like. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.520 |
SDI23477.1 | recA | SAMN05421846_105135 | SAMN05421846_101247 | Peptidase S24-like. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.966 |
SDI31463.1 | SDI31497.1 | SAMN05421846_106103 | SAMN05421846_106104 | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | Protein of unknown function. | 0.756 |
SDI31463.1 | SDI31527.1 | SAMN05421846_106103 | SAMN05421846_106105 | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA. | 0.786 |
SDI31463.1 | priA | SAMN05421846_106103 | SAMN05421846_11341 | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.725 |
SDI31497.1 | SDI31463.1 | SAMN05421846_106104 | SAMN05421846_106103 | Protein of unknown function. | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.756 |
SDI31497.1 | SDI31527.1 | SAMN05421846_106104 | SAMN05421846_106105 | Protein of unknown function. | DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA. | 0.746 |
SDI31527.1 | SDI23477.1 | SAMN05421846_106105 | SAMN05421846_105135 | DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA. | Peptidase S24-like. | 0.707 |
SDI31527.1 | SDI31463.1 | SAMN05421846_106105 | SAMN05421846_106103 | DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA. | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.786 |
SDI31527.1 | SDI31497.1 | SAMN05421846_106105 | SAMN05421846_106104 | DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA. | Protein of unknown function. | 0.746 |
SDI31527.1 | mfd | SAMN05421846_106105 | SAMN05421846_11815 | DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA. | Transcription-repair coupling factor (superfamily II helicase); Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.615 |
SDI31527.1 | pheT | SAMN05421846_106105 | SAMN05421846_11362 | DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA. | phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.554 |
SDI31527.1 | polA | SAMN05421846_106105 | SAMN05421846_11053 | DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.669 |
SDI31527.1 | priA | SAMN05421846_106105 | SAMN05421846_11341 | DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA. | Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.599 |
SDI31527.1 | recA | SAMN05421846_106105 | SAMN05421846_101247 | DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.731 |
SDI31527.1 | recF | SAMN05421846_106105 | SAMN05421846_11393 | DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.549 |
SDI31527.1 | ruvA | SAMN05421846_106105 | SAMN05421846_1033 | DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA. | Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.651 |
mfd | SDI31527.1 | SAMN05421846_11815 | SAMN05421846_106105 | Transcription-repair coupling factor (superfamily II helicase); Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA. | 0.615 |
mfd | polA | SAMN05421846_11815 | SAMN05421846_11053 | Transcription-repair coupling factor (superfamily II helicase); Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.815 |