STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI71485.1Hypothetical protein. (175 aa)    
Predicted Functional Partners:
SDI78385.1
Iron complex transport system substrate-binding protein.
 
    0.678
SDI53987.1
ABC-type Fe3+-hydroxamate transport system, substrate-binding protein.
  
    0.626
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
       0.515
SDI41046.1
Iron complex transport system ATP-binding protein.
 
    0.512
SDI71468.1
4'-phosphopantetheinyl transferase superfamily protein; Belongs to the P-Pant transferase superfamily.
       0.464
SDI01752.1
GxxExxY protein.
  
    0.438
SDI32357.1
GxxExxY protein.
  
    0.438
SDI29029.1
GxxExxY protein.
  
    0.438
SDI65194.1
GxxExxY protein.
  
    0.438
SDI73312.1
GxxExxY protein.
  
    0.438
Your Current Organism:
Chryseobacterium taeanense
NCBI taxonomy Id: 311334
Other names: C. taeanense, Chryseobacterium taeanense Park et al. 2006, DSM 17071, KCTC 12381, NBRC 100863, strain PHA3-4
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