Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avi_0329 | Avi_3342 | Avi_0329 | Avi_3342 | Conserved hypothetical protein. | Peptide synthetase. | 0.633 |
Avi_0329 | Avi_4330 | Avi_0329 | Avi_4330 | Conserved hypothetical protein. | Polyketide synthetase protein. | 0.598 |
Avi_0329 | Avi_5693 | Avi_0329 | Avi_5693 | Conserved hypothetical protein. | Non-ribosomal peptide synthetase domain-containing protein. | 0.651 |
Avi_0329 | fabD | Avi_0329 | Avi_1527 | Conserved hypothetical protein. | Malonyl CoA-acyl carrier protein transacylase. | 0.562 |
Avi_0329 | fadB | Avi_0329 | Avi_0597 | Conserved hypothetical protein. | enoyl-CoA hydratase. | 0.567 |
Avi_0329 | guaA | Avi_0329 | Avi_0327 | Conserved hypothetical protein. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.646 |
Avi_0329 | pfs | Avi_0329 | Avi_0328 | Conserved hypothetical protein. | 5prime-methylthioadenosine/S- adenosylhomocysteine nucleosidase. | 0.803 |
Avi_0329 | plsX | Avi_0329 | Avi_1628 | Conserved hypothetical protein. | Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | 0.708 |
Avi_0329 | purA | Avi_0329 | Avi_3544 | Conserved hypothetical protein. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.551 |
Avi_0329 | tspO | Avi_0329 | Avi_0330 | Conserved hypothetical protein. | Tryptophan-rich sensory protein. | 0.566 |
Avi_3342 | Avi_0329 | Avi_3342 | Avi_0329 | Peptide synthetase. | Conserved hypothetical protein. | 0.633 |
Avi_3342 | Avi_4330 | Avi_3342 | Avi_4330 | Peptide synthetase. | Polyketide synthetase protein. | 0.999 |
Avi_3342 | Avi_5693 | Avi_3342 | Avi_5693 | Peptide synthetase. | Non-ribosomal peptide synthetase domain-containing protein. | 0.994 |
Avi_3342 | fabD | Avi_3342 | Avi_1527 | Peptide synthetase. | Malonyl CoA-acyl carrier protein transacylase. | 0.940 |
Avi_3342 | fadB | Avi_3342 | Avi_0597 | Peptide synthetase. | enoyl-CoA hydratase. | 0.620 |
Avi_4330 | Avi_0329 | Avi_4330 | Avi_0329 | Polyketide synthetase protein. | Conserved hypothetical protein. | 0.598 |
Avi_4330 | Avi_3342 | Avi_4330 | Avi_3342 | Polyketide synthetase protein. | Peptide synthetase. | 0.999 |
Avi_4330 | Avi_5693 | Avi_4330 | Avi_5693 | Polyketide synthetase protein. | Non-ribosomal peptide synthetase domain-containing protein. | 0.996 |
Avi_4330 | fabD | Avi_4330 | Avi_1527 | Polyketide synthetase protein. | Malonyl CoA-acyl carrier protein transacylase. | 0.998 |
Avi_4330 | fadB | Avi_4330 | Avi_0597 | Polyketide synthetase protein. | enoyl-CoA hydratase. | 0.869 |
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