STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bglBeta-glucosidase. (457 aa)    
Predicted Functional Partners:
Avi_0107
Beta-glucosidase protein.
 
  
 0.924
Avi_6012
Endoglucanase precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.921
Avi_6257
Conserved hypothetical protein; Belongs to the glycosyl hydrolase 3 family.
    
 0.912
aglA
Alpha-glucosidase.
  
 
 0.910
aglA-2
Alpha-glucosidase.
  
 
 0.910
bgl-2
Beta-glucosidase.
  
  
 
0.909
Avi_3826
Hypothetical protein.
       0.773
Avi_5337
Aldolase.
  
  
 0.723
Avi_3825
Conserved hypothetical protein.
       0.511
exsH
Endo-1,3-1,4-beta-glycanase, C-terminal secretion signal protein.
  
 
 0.480
Your Current Organism:
Agrobacterium vitis
NCBI taxonomy Id: 311402
Other names: A. vitis S4, Agrobacterium vitis S4, Agrobacterium vitis str. S4, Agrobacterium vitis strain S4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.