Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avi_3947 | cheA | Avi_3947 | Avi_4077 | Methyl-accepting chemotaxis protein. | Chemotaxis protein histidine kinase. | 0.877 |
Avi_3947 | cheA-2 | Avi_3947 | Avi_4316 | Methyl-accepting chemotaxis protein. | Chemotaxis protein histidine kinase. | 0.891 |
Avi_3947 | cheR-2 | Avi_3947 | Avi_4310 | Methyl-accepting chemotaxis protein. | Chemotaxis methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.828 |
Avi_3947 | cheW | Avi_3947 | Avi_2609 | Methyl-accepting chemotaxis protein. | Chemotaxis protein. | 0.842 |
Avi_3947 | cheW-2 | Avi_3947 | Avi_2861 | Methyl-accepting chemotaxis protein. | Chemotaxis protein. | 0.838 |
Avi_3947 | cheW-3 | Avi_3947 | Avi_4076 | Methyl-accepting chemotaxis protein. | Chemotaxis protein. | 0.842 |
Avi_3947 | cheW-4 | Avi_3947 | Avi_4092 | Methyl-accepting chemotaxis protein. | Chemotaxis protein. | 0.837 |
Avi_3947 | cheW-5 | Avi_3947 | Avi_4311 | Methyl-accepting chemotaxis protein. | Chemotaxis protein. | 0.864 |
Avi_3947 | cheW-6 | Avi_3947 | Avi_4315 | Methyl-accepting chemotaxis protein. | Chemotaxis protein. | 0.862 |
Avi_3947 | cheW-7 | Avi_3947 | Avi_5555 | Methyl-accepting chemotaxis protein. | Chemotaxis protein. | 0.849 |
cheA | Avi_3947 | Avi_4077 | Avi_3947 | Chemotaxis protein histidine kinase. | Methyl-accepting chemotaxis protein. | 0.877 |
cheA | cheA-2 | Avi_4077 | Avi_4316 | Chemotaxis protein histidine kinase. | Chemotaxis protein histidine kinase. | 0.917 |
cheA | cheR-2 | Avi_4077 | Avi_4310 | Chemotaxis protein histidine kinase. | Chemotaxis methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.965 |
cheA | cheW | Avi_4077 | Avi_2609 | Chemotaxis protein histidine kinase. | Chemotaxis protein. | 0.994 |
cheA | cheW-2 | Avi_4077 | Avi_2861 | Chemotaxis protein histidine kinase. | Chemotaxis protein. | 0.994 |
cheA | cheW-3 | Avi_4077 | Avi_4076 | Chemotaxis protein histidine kinase. | Chemotaxis protein. | 0.998 |
cheA | cheW-4 | Avi_4077 | Avi_4092 | Chemotaxis protein histidine kinase. | Chemotaxis protein. | 0.994 |
cheA | cheW-5 | Avi_4077 | Avi_4311 | Chemotaxis protein histidine kinase. | Chemotaxis protein. | 0.994 |
cheA | cheW-6 | Avi_4077 | Avi_4315 | Chemotaxis protein histidine kinase. | Chemotaxis protein. | 0.992 |
cheA | cheW-7 | Avi_4077 | Avi_5555 | Chemotaxis protein histidine kinase. | Chemotaxis protein. | 0.994 |
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