Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avi_0620 | Avi_4330 | Avi_0620 | Avi_4330 | Two component sensor kinase/response regulator hybrid. | Polyketide synthetase protein. | 0.612 |
Avi_0620 | Avi_5226 | Avi_0620 | Avi_5226 | Two component sensor kinase/response regulator hybrid. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.442 |
Avi_0620 | maeB | Avi_0620 | Avi_1891 | Two component sensor kinase/response regulator hybrid. | NADP-dependent malic enzyme. | 0.625 |
Avi_2931 | Avi_4330 | Avi_2931 | Avi_4330 | Conserved hypothetical protein. | Polyketide synthetase protein. | 0.540 |
Avi_2931 | Avi_5226 | Avi_2931 | Avi_5226 | Conserved hypothetical protein. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.476 |
Avi_4330 | Avi_0620 | Avi_4330 | Avi_0620 | Polyketide synthetase protein. | Two component sensor kinase/response regulator hybrid. | 0.612 |
Avi_4330 | Avi_2931 | Avi_4330 | Avi_2931 | Polyketide synthetase protein. | Conserved hypothetical protein. | 0.540 |
Avi_4330 | Avi_5226 | Avi_4330 | Avi_5226 | Polyketide synthetase protein. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.535 |
Avi_4330 | maeB | Avi_4330 | Avi_1891 | Polyketide synthetase protein. | NADP-dependent malic enzyme. | 0.764 |
Avi_5226 | Avi_0620 | Avi_5226 | Avi_0620 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Two component sensor kinase/response regulator hybrid. | 0.442 |
Avi_5226 | Avi_2931 | Avi_5226 | Avi_2931 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Conserved hypothetical protein. | 0.476 |
Avi_5226 | Avi_4330 | Avi_5226 | Avi_4330 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Polyketide synthetase protein. | 0.535 |
Avi_5226 | Avi_5227 | Avi_5226 | Avi_5227 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | MFS permease. | 0.778 |
Avi_5226 | maeB | Avi_5226 | Avi_1891 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | NADP-dependent malic enzyme. | 0.447 |
Avi_5227 | Avi_5226 | Avi_5227 | Avi_5226 | MFS permease. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.778 |
maeB | Avi_0620 | Avi_1891 | Avi_0620 | NADP-dependent malic enzyme. | Two component sensor kinase/response regulator hybrid. | 0.625 |
maeB | Avi_4330 | Avi_1891 | Avi_4330 | NADP-dependent malic enzyme. | Polyketide synthetase protein. | 0.764 |
maeB | Avi_5226 | Avi_1891 | Avi_5226 | NADP-dependent malic enzyme. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.447 |