STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arad_0590N-carbamoyl-L-amino acid amidohydrolase protein. (424 aa)    
Predicted Functional Partners:
hydA
Dihydropyrimidinase.
 
 
 0.952
hydA-2
Dihydropyrimidinase.
 
 
 0.951
Arad_0591
Allantoinase protein.
 
 
 0.936
Arad_3441
Dihydroorotate oxidase protein.
 
 0.873
Arad_3439
NADPH-dependent glutamate synthase small chain protein.
  
 
  0.826
Arad_0588
Conserved hypothetical protein.
 
     0.820
matB-3
long-chain-fatty-acid-CoA ligase protein.
   
 
  0.801
hutHch
Histidine ammonia-lyase protein.
     
 0.777
Arad_3328
Conserved hypothetical protein.
   
 0.735
Arad_4484
Aldehyde dehydrogenase protein.
     
 0.602
Your Current Organism:
Agrobacterium radiobacter
NCBI taxonomy Id: 311403
Other names: A. radiobacter K84, Agrobacterium radiobacter K84, Agrobacterium radiobacter str. K84, Agrobacterium radiobacter strain K84, Agrobacterium rhizogenes K84, Agrobacterium tumefaciens K84, Rhizobium radiobacter K84
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