Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arad_1663 | Arad_1665 | Arad_1663 | Arad_1665 | Methyltransferase protein. | Oxidoreductase protein. | 0.467 |
Arad_1663 | Arad_1793 | Arad_1663 | Arad_1793 | Methyltransferase protein. | Glycosyltransferase protein. | 0.428 |
Arad_1663 | Arad_3073 | Arad_1663 | Arad_3073 | Methyltransferase protein. | Polysaccharide biosynthesis protein. | 0.404 |
Arad_1663 | Arad_7635 | Arad_1663 | Arad_7635 | Methyltransferase protein. | Non-ribosomal peptide synthetase. | 0.533 |
Arad_1663 | glgB | Arad_1663 | Arad_3869 | Methyltransferase protein. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.522 |
Arad_1663 | sqdD | Arad_1663 | Arad_3687 | Methyltransferase protein. | Glycosyltransferase (sulfolipid biosynthesis) protein. | 0.455 |
Arad_1665 | Arad_1663 | Arad_1665 | Arad_1663 | Oxidoreductase protein. | Methyltransferase protein. | 0.467 |
Arad_1793 | Arad_1663 | Arad_1793 | Arad_1663 | Glycosyltransferase protein. | Methyltransferase protein. | 0.428 |
Arad_1793 | Arad_3073 | Arad_1793 | Arad_3073 | Glycosyltransferase protein. | Polysaccharide biosynthesis protein. | 0.795 |
Arad_1793 | Arad_7635 | Arad_1793 | Arad_7635 | Glycosyltransferase protein. | Non-ribosomal peptide synthetase. | 0.490 |
Arad_3073 | Arad_1663 | Arad_3073 | Arad_1663 | Polysaccharide biosynthesis protein. | Methyltransferase protein. | 0.404 |
Arad_3073 | Arad_1793 | Arad_3073 | Arad_1793 | Polysaccharide biosynthesis protein. | Glycosyltransferase protein. | 0.795 |
Arad_7635 | Arad_1663 | Arad_7635 | Arad_1663 | Non-ribosomal peptide synthetase. | Methyltransferase protein. | 0.533 |
Arad_7635 | Arad_1793 | Arad_7635 | Arad_1793 | Non-ribosomal peptide synthetase. | Glycosyltransferase protein. | 0.490 |
glgB | Arad_1663 | Arad_3869 | Arad_1663 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Methyltransferase protein. | 0.522 |
glgB | sqdD | Arad_3869 | Arad_3687 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Glycosyltransferase (sulfolipid biosynthesis) protein. | 0.859 |
sqdD | Arad_1663 | Arad_3687 | Arad_1663 | Glycosyltransferase (sulfolipid biosynthesis) protein. | Methyltransferase protein. | 0.455 |
sqdD | glgB | Arad_3687 | Arad_3869 | Glycosyltransferase (sulfolipid biosynthesis) protein. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.859 |