STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arad_2015Membrane protein. (690 aa)    
Predicted Functional Partners:
mexE1
Multidrug-efflux system secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.963
Arad_2016
Hypothetical protein.
 
   
 0.961
Arad_2014
Transcriptional regulator protein.
 
   
 0.930
nifUch2
Nitrogen fixation protein.
   
    0.737
Arad_8923
ABC transporter substrate-binding protein.
  
     0.529
Arad_2012
Conserved hypothetical protein.
       0.513
Arad_2875
Aspartate racemase protein.
   
    0.481
Arad_0477
Efflux transporter protein.
  
  
 0.449
Arad_0997
Conserved hypothetical protein.
  
     0.441
Arad_7761
Urease-associated protein.
  
     0.424
Your Current Organism:
Agrobacterium radiobacter
NCBI taxonomy Id: 311403
Other names: A. radiobacter K84, Agrobacterium radiobacter K84, Agrobacterium radiobacter str. K84, Agrobacterium radiobacter strain K84, Agrobacterium rhizogenes K84, Agrobacterium tumefaciens K84, Rhizobium radiobacter K84
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.