STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potC-2Spermidine/putrescine ABC transporter. (271 aa)    
Predicted Functional Partners:
Arad_2173
Polyamine ABC transporter.
  
 0.966
Arad_2172
ABC transporter, substrate binding protein.
 
  
 0.923
potH-3
Spermidine/putrescine ABC transporter.
  
 0.917
potH-4
Spermidine/putrescine ABC transporter.
  
 0.917
Arad_2171
ABC transporter; Belongs to the ABC transporter superfamily.
 
  
 0.903
potG
Spermidine/putrescine ABC transporter; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  
 0.886
potH-2
Spermidine/putrescine ABC transporter.
 
  
 0.884
Arad_9719
Polyamine ABC transporter.
  
 0.854
Arad_7050
Polyamine ABC transporter.
  
 0.853
Arad_7525
Spermidine/putrescine ABC transporter.
  
 0.850
Your Current Organism:
Agrobacterium radiobacter
NCBI taxonomy Id: 311403
Other names: A. radiobacter K84, Agrobacterium radiobacter K84, Agrobacterium radiobacter str. K84, Agrobacterium radiobacter strain K84, Agrobacterium rhizogenes K84, Agrobacterium tumefaciens K84, Rhizobium radiobacter K84
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.