Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arad_7898 | folE | Arad_7898 | Arad_2476 | Adenylate cyclase protein. | GTP cyclohydrolase I. | 0.814 |
Arad_7898 | mazG | Arad_7898 | Arad_2273 | Adenylate cyclase protein. | MazG protein. | 0.918 |
Arad_7898 | moaA | Arad_7898 | Arad_2701 | Adenylate cyclase protein. | Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. | 0.823 |
Arad_7898 | ndk | Arad_7898 | Arad_1702 | Adenylate cyclase protein. | Nucleoside-diphosphate-kinase protein; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.922 |
Arad_7898 | ribA | Arad_7898 | Arad_1211 | Adenylate cyclase protein. | GTP cyclohydrolase II protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.828 |
folB | folE | Arad_2636 | Arad_2476 | Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | GTP cyclohydrolase I. | 0.959 |
folB | folK | Arad_2636 | Arad_2634 | Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase. | 0.999 |
folB | folP | Arad_2636 | Arad_2637 | Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | Dihydropteroate synthase. | 0.999 |
folB | ribA | Arad_2636 | Arad_1211 | Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | GTP cyclohydrolase II protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.589 |
folE | Arad_7898 | Arad_2476 | Arad_7898 | GTP cyclohydrolase I. | Adenylate cyclase protein. | 0.814 |
folE | folB | Arad_2476 | Arad_2636 | GTP cyclohydrolase I. | Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 0.959 |
folE | folK | Arad_2476 | Arad_2634 | GTP cyclohydrolase I. | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase. | 0.971 |
folE | folP | Arad_2476 | Arad_2637 | GTP cyclohydrolase I. | Dihydropteroate synthase. | 0.978 |
folE | hisI | Arad_2476 | Arad_2477 | GTP cyclohydrolase I. | phosphoribosyl-AMP cyclohydrolase protein; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. | 0.817 |
folE | ialA-2 | Arad_2476 | Arad_8648 | GTP cyclohydrolase I. | Nucleoside polyphosphate hydrolase protein. | 0.901 |
folE | mazG | Arad_2476 | Arad_2273 | GTP cyclohydrolase I. | MazG protein. | 0.840 |
folE | moaA | Arad_2476 | Arad_2701 | GTP cyclohydrolase I. | Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. | 0.908 |
folE | ndk | Arad_2476 | Arad_1702 | GTP cyclohydrolase I. | Nucleoside-diphosphate-kinase protein; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.848 |
folE | ribA | Arad_2476 | Arad_1211 | GTP cyclohydrolase I. | GTP cyclohydrolase II protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.951 |
folK | folB | Arad_2634 | Arad_2636 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase. | Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 0.999 |
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