Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arad_0130 | Arad_2616 | Arad_0130 | Arad_2616 | Transcriptional regulator protein. | Transcriptional regulator protein. | 0.481 |
Arad_0130 | Arad_4077 | Arad_0130 | Arad_4077 | Transcriptional regulator protein. | Transcriptional regulator protein. | 0.617 |
Arad_0130 | Arad_4175 | Arad_0130 | Arad_4175 | Transcriptional regulator protein. | Transcriptional regulator protein. | 0.613 |
Arad_0130 | Arad_4811 | Arad_0130 | Arad_4811 | Transcriptional regulator protein. | Transcriptional regulator protein. | 0.665 |
Arad_2616 | Arad_0130 | Arad_2616 | Arad_0130 | Transcriptional regulator protein. | Transcriptional regulator protein. | 0.481 |
Arad_2616 | Arad_4077 | Arad_2616 | Arad_4077 | Transcriptional regulator protein. | Transcriptional regulator protein. | 0.524 |
Arad_2616 | Arad_4175 | Arad_2616 | Arad_4175 | Transcriptional regulator protein. | Transcriptional regulator protein. | 0.454 |
Arad_2616 | Arad_4811 | Arad_2616 | Arad_4811 | Transcriptional regulator protein. | Transcriptional regulator protein. | 0.580 |
Arad_2616 | Arad_7039 | Arad_2616 | Arad_7039 | Transcriptional regulator protein. | Aldehyde dehydrogenase protein; Belongs to the aldehyde dehydrogenase family. | 0.675 |
Arad_2616 | Arad_7081 | Arad_2616 | Arad_7081 | Transcriptional regulator protein. | Transcriptional regulator protein. | 0.584 |
Arad_2616 | Arad_9928 | Arad_2616 | Arad_9928 | Transcriptional regulator protein. | Transcriptional regulator protein. | 0.477 |
Arad_2616 | alaS2 | Arad_2616 | Arad_2617 | Transcriptional regulator protein. | alanyl-tRNA synthetase protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.597 |
Arad_2616 | polA | Arad_2616 | Arad_0271 | Transcriptional regulator protein. | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.694 |
Arad_2616 | recA | Arad_2616 | Arad_2618 | Transcriptional regulator protein. | Recombinase A protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.480 |
Arad_4077 | Arad_0130 | Arad_4077 | Arad_0130 | Transcriptional regulator protein. | Transcriptional regulator protein. | 0.617 |
Arad_4077 | Arad_2616 | Arad_4077 | Arad_2616 | Transcriptional regulator protein. | Transcriptional regulator protein. | 0.524 |
Arad_4077 | Arad_7039 | Arad_4077 | Arad_7039 | Transcriptional regulator protein. | Aldehyde dehydrogenase protein; Belongs to the aldehyde dehydrogenase family. | 0.671 |
Arad_4077 | Arad_7081 | Arad_4077 | Arad_7081 | Transcriptional regulator protein. | Transcriptional regulator protein. | 0.676 |
Arad_4077 | polA | Arad_4077 | Arad_0271 | Transcriptional regulator protein. | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.691 |
Arad_4175 | Arad_0130 | Arad_4175 | Arad_0130 | Transcriptional regulator protein. | Transcriptional regulator protein. | 0.613 |
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