Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arad_0812 | Arad_2708 | Arad_0812 | Arad_2708 | Hemagglutinin protein. | Outer membrane protein. | 0.593 |
Arad_0812 | Arad_3509 | Arad_0812 | Arad_3509 | Hemagglutinin protein. | Conserved hypothetical protein. | 0.536 |
Arad_0812 | Arad_9036 | Arad_0812 | Arad_9036 | Hemagglutinin protein. | Peptidase M48, Ste24p. | 0.455 |
Arad_0812 | ygbF | Arad_0812 | Arad_3677 | Hemagglutinin protein. | Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. | 0.420 |
Arad_2675 | Arad_2708 | Arad_2675 | Arad_2708 | Periplasmic component of the Tol biopolymer transport system. | Outer membrane protein. | 0.895 |
Arad_2675 | Arad_9036 | Arad_2675 | Arad_9036 | Periplasmic component of the Tol biopolymer transport system. | Peptidase M48, Ste24p. | 0.699 |
Arad_2675 | ygbF | Arad_2675 | Arad_3677 | Periplasmic component of the Tol biopolymer transport system. | Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. | 0.711 |
Arad_2708 | Arad_0812 | Arad_2708 | Arad_0812 | Outer membrane protein. | Hemagglutinin protein. | 0.593 |
Arad_2708 | Arad_2675 | Arad_2708 | Arad_2675 | Outer membrane protein. | Periplasmic component of the Tol biopolymer transport system. | 0.895 |
Arad_2708 | Arad_3509 | Arad_2708 | Arad_3509 | Outer membrane protein. | Conserved hypothetical protein. | 0.607 |
Arad_2708 | Arad_3920 | Arad_2708 | Arad_3920 | Outer membrane protein. | Conserved hypothetical protein. | 0.577 |
Arad_2708 | Arad_9036 | Arad_2708 | Arad_9036 | Outer membrane protein. | Peptidase M48, Ste24p. | 0.573 |
Arad_2708 | rpoC | Arad_2708 | Arad_1963 | Outer membrane protein. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.607 |
Arad_2708 | rpsM | Arad_2708 | Arad_2003 | Outer membrane protein. | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.688 |
Arad_2708 | tolB | Arad_2708 | Arad_3679 | Outer membrane protein. | Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.895 |
Arad_2708 | tolR | Arad_2708 | Arad_3682 | Outer membrane protein. | Protein TolR. | 0.751 |
Arad_2708 | ygbF | Arad_2708 | Arad_3677 | Outer membrane protein. | Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. | 0.594 |
Arad_3509 | Arad_0812 | Arad_3509 | Arad_0812 | Conserved hypothetical protein. | Hemagglutinin protein. | 0.536 |
Arad_3509 | Arad_2708 | Arad_3509 | Arad_2708 | Conserved hypothetical protein. | Outer membrane protein. | 0.607 |
Arad_3920 | Arad_2708 | Arad_3920 | Arad_2708 | Conserved hypothetical protein. | Outer membrane protein. | 0.577 |
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