Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arad_2814 | Arad_2816 | Arad_2814 | Arad_2816 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.629 |
Arad_2814 | Arad_2818 | Arad_2814 | Arad_2818 | Conserved hypothetical protein. | Trimethylamine methyltransferase protein; Belongs to the trimethylamine methyltransferase family. | 0.519 |
Arad_2814 | Arad_2823 | Arad_2814 | Arad_2823 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.408 |
Arad_2816 | Arad_2814 | Arad_2816 | Arad_2814 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.629 |
Arad_2816 | Arad_2818 | Arad_2816 | Arad_2818 | Conserved hypothetical protein. | Trimethylamine methyltransferase protein; Belongs to the trimethylamine methyltransferase family. | 0.858 |
Arad_2816 | Arad_2823 | Arad_2816 | Arad_2823 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.732 |
Arad_2816 | Arad_2824 | Arad_2816 | Arad_2824 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.761 |
Arad_2816 | Arad_2829 | Arad_2816 | Arad_2829 | Conserved hypothetical protein. | Methyltransferase protein. | 0.607 |
Arad_2816 | Arad_3336 | Arad_2816 | Arad_3336 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the trimethylamine methyltransferase family. | 0.724 |
Arad_2816 | Arad_9262 | Arad_2816 | Arad_9262 | Conserved hypothetical protein. | acyl-CoA synthetase protein. | 0.688 |
Arad_2816 | fdhA | Arad_2816 | Arad_4285 | Conserved hypothetical protein. | Formate dehydrogenase, alpha subunit. | 0.758 |
Arad_2816 | metH-2 | Arad_2816 | Arad_2819 | Conserved hypothetical protein. | 5-methyltetrahydrofolate--homocysteine S-methyltransferase protein. | 0.683 |
Arad_2816 | narB | Arad_2816 | Arad_8702 | Conserved hypothetical protein. | Nitrate reductase large subunit protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.801 |
Arad_2818 | Arad_2814 | Arad_2818 | Arad_2814 | Trimethylamine methyltransferase protein; Belongs to the trimethylamine methyltransferase family. | Conserved hypothetical protein. | 0.519 |
Arad_2818 | Arad_2816 | Arad_2818 | Arad_2816 | Trimethylamine methyltransferase protein; Belongs to the trimethylamine methyltransferase family. | Conserved hypothetical protein. | 0.858 |
Arad_2818 | Arad_2823 | Arad_2818 | Arad_2823 | Trimethylamine methyltransferase protein; Belongs to the trimethylamine methyltransferase family. | Conserved hypothetical protein. | 0.845 |
Arad_2818 | Arad_2824 | Arad_2818 | Arad_2824 | Trimethylamine methyltransferase protein; Belongs to the trimethylamine methyltransferase family. | Conserved hypothetical protein. | 0.825 |
Arad_2818 | Arad_2829 | Arad_2818 | Arad_2829 | Trimethylamine methyltransferase protein; Belongs to the trimethylamine methyltransferase family. | Methyltransferase protein. | 0.812 |
Arad_2818 | Arad_3336 | Arad_2818 | Arad_3336 | Trimethylamine methyltransferase protein; Belongs to the trimethylamine methyltransferase family. | Conserved hypothetical protein; Belongs to the trimethylamine methyltransferase family. | 0.910 |
Arad_2818 | Arad_9262 | Arad_2818 | Arad_9262 | Trimethylamine methyltransferase protein; Belongs to the trimethylamine methyltransferase family. | acyl-CoA synthetase protein. | 0.425 |
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