STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arad_2829Methyltransferase protein. (321 aa)    
Predicted Functional Partners:
metH
5-methyltetrahydrofolate--homocysteine S-methyltransferase protein.
 
 0.998
metH-2
5-methyltetrahydrofolate--homocysteine S-methyltransferase protein.
  
 0.986
metF
5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
 
 
 0.977
metH-3
5-methyltetrahydrofolate--homocysteine S-methyltransferase protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
 
 
0.950
metK
S-adenosylmethionine synthetase; Belongs to the AdoMet synthase family.
    
 0.923
Arad_1818
O-acetylhomoserine sulfhydrylase protein.
  
 
 0.923
fhs
Formate-tetrahydrofolate ligase protein; Belongs to the formate--tetrahydrofolate ligase family.
    
 0.922
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
  
 
 0.921
metC
Cystathionine beta- lyase protein.
  
 
 0.921
ahcY
Adenosylhomocysteinase protein; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
    
 0.917
Your Current Organism:
Agrobacterium radiobacter
NCBI taxonomy Id: 311403
Other names: A. radiobacter K84, Agrobacterium radiobacter K84, Agrobacterium radiobacter str. K84, Agrobacterium radiobacter strain K84, Agrobacterium rhizogenes K84, Agrobacterium tumefaciens K84, Rhizobium radiobacter K84
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