Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arad_0038 | Arad_1478 | Arad_0038 | Arad_1478 | Two-component sensor histidine kinase protein. | Two-component sensor histidine kinase protein. | 0.434 |
Arad_0038 | Arad_3335 | Arad_0038 | Arad_3335 | Two-component sensor histidine kinase protein. | Two-component sensor histidine kinase/response regulator hybrid protein. | 0.851 |
Arad_0038 | Arad_3506 | Arad_0038 | Arad_3506 | Two-component sensor histidine kinase protein. | Conserved hypothetical protein. | 0.710 |
Arad_0038 | Arad_4203 | Arad_0038 | Arad_4203 | Two-component sensor histidine kinase protein. | Two-component response regulator protein. | 0.588 |
Arad_0038 | Arad_8591 | Arad_0038 | Arad_8591 | Two-component sensor histidine kinase protein. | Two-component sensor histidine kinase/response regulator hybrid protein. | 0.934 |
Arad_0038 | celR1 | Arad_0038 | Arad_1884 | Two-component sensor histidine kinase protein. | Two-component response regulator protein. | 0.837 |
Arad_0038 | ctrA | Arad_0038 | Arad_3503 | Two-component sensor histidine kinase protein. | Two-component response regulator protein controls chromosomal replication initiation. | 0.836 |
Arad_0038 | fixL | Arad_0038 | Arad_7578 | Two-component sensor histidine kinase protein. | Two-component sensor histidine kinase protein. | 0.923 |
Arad_0038 | phoR | Arad_0038 | Arad_0764 | Two-component sensor histidine kinase protein. | Phosphate regulon sensor kinase PhoR. | 0.622 |
Arad_1478 | Arad_0038 | Arad_1478 | Arad_0038 | Two-component sensor histidine kinase protein. | Two-component sensor histidine kinase protein. | 0.434 |
Arad_1478 | Arad_3335 | Arad_1478 | Arad_3335 | Two-component sensor histidine kinase protein. | Two-component sensor histidine kinase/response regulator hybrid protein. | 0.539 |
Arad_1478 | Arad_4203 | Arad_1478 | Arad_4203 | Two-component sensor histidine kinase protein. | Two-component response regulator protein. | 0.782 |
Arad_1478 | Arad_8591 | Arad_1478 | Arad_8591 | Two-component sensor histidine kinase protein. | Two-component sensor histidine kinase/response regulator hybrid protein. | 0.894 |
Arad_1478 | celR1 | Arad_1478 | Arad_1884 | Two-component sensor histidine kinase protein. | Two-component response regulator protein. | 0.988 |
Arad_1478 | ctrA | Arad_1478 | Arad_3503 | Two-component sensor histidine kinase protein. | Two-component response regulator protein controls chromosomal replication initiation. | 0.771 |
Arad_1478 | fixL | Arad_1478 | Arad_7578 | Two-component sensor histidine kinase protein. | Two-component sensor histidine kinase protein. | 0.823 |
Arad_1478 | phoR | Arad_1478 | Arad_0764 | Two-component sensor histidine kinase protein. | Phosphate regulon sensor kinase PhoR. | 0.438 |
Arad_3335 | Arad_0038 | Arad_3335 | Arad_0038 | Two-component sensor histidine kinase/response regulator hybrid protein. | Two-component sensor histidine kinase protein. | 0.851 |
Arad_3335 | Arad_1478 | Arad_3335 | Arad_1478 | Two-component sensor histidine kinase/response regulator hybrid protein. | Two-component sensor histidine kinase protein. | 0.539 |
Arad_3335 | Arad_4203 | Arad_3335 | Arad_4203 | Two-component sensor histidine kinase/response regulator hybrid protein. | Two-component response regulator protein. | 0.705 |
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