STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arad_4051Multidrug efflux transporter protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1051 aa)    
Predicted Functional Partners:
Arad_4052
Multidrug efflux transporter protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.953
Arad_8308
Protein secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.841
Arad_8309
Protein secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.840
Arad_8556
Protein secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.840
Arad_8580
Protein secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.840
Arad_4053
Transcriptional regulator protein.
 
     0.730
Arad_4474
Efflux cation transporter protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.580
Arad_1513
Protein secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.504
Arad_3457
Protein secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.481
mexE1-3
Multidrug-efflux system secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.476
Your Current Organism:
Agrobacterium radiobacter
NCBI taxonomy Id: 311403
Other names: A. radiobacter K84, Agrobacterium radiobacter K84, Agrobacterium radiobacter str. K84, Agrobacterium radiobacter strain K84, Agrobacterium rhizogenes K84, Agrobacterium tumefaciens K84, Rhizobium radiobacter K84
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.