STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arad_4301Iron alcohol dehydrogenase protein. (381 aa)    
Predicted Functional Partners:
dhaL
Aldehyde dehydrogenase protein; Belongs to the aldehyde dehydrogenase family.
 
 
 0.815
Arad_4299
Isomerase protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
       0.722
Arad_2510
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
   
 
 0.685
glgA
Glycogen synthase (starch (bacterial glycogen) synthase) protein; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.612
Arad_4303
Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family.
  
    0.546
Arad_1406
Alcohol dehydrogenase protein.
  
 
 0.441
adh
Alcohol dehydrogenase (NADP+) protein.
  
 
 0.441
adhA2
Alcohol dehydrogenase protein.
  
 
 0.441
Arad_3042
Aldehyde dehydrogenase protein; Belongs to the aldehyde dehydrogenase family.
 
 0.412
pckA
Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
   
  
 0.411
Your Current Organism:
Agrobacterium radiobacter
NCBI taxonomy Id: 311403
Other names: A. radiobacter K84, Agrobacterium radiobacter K84, Agrobacterium radiobacter str. K84, Agrobacterium radiobacter strain K84, Agrobacterium rhizogenes K84, Agrobacterium tumefaciens K84, Rhizobium radiobacter K84
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.