STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arad_4530Amino acid ABC transporter. (293 aa)    
Predicted Functional Partners:
Arad_4531
Amino acid ABC transporter.
 
  
 0.957
Arad_4532
Amino acid ABC transporter.
 
  
 0.903
Arad_8079
Amino acid ABC transporter.
 
  
 0.818
Arad_8521
Amino acid ABC transporter.
 
  
 0.815
Arad_8081
Amino acid ABC transporter.
 
  
 0.812
Arad_8522
Amino acid ABC transporter.
 
  
 0.811
tauB
Taurine uptake ABC transporter; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.
 
  
 0.804
Arad_7224
Amino acid ABC transporter.
 
  
 0.768
Arad_7706
Aliphatic sulphonate ABC transporter.
 
  
 0.762
tauB-3
Taurine uptake ABC transporter.
 
  
 0.709
Your Current Organism:
Agrobacterium radiobacter
NCBI taxonomy Id: 311403
Other names: A. radiobacter K84, Agrobacterium radiobacter K84, Agrobacterium radiobacter str. K84, Agrobacterium radiobacter strain K84, Agrobacterium rhizogenes K84, Agrobacterium tumefaciens K84, Rhizobium radiobacter K84
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.