STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mocBch2Rhizopine ABC transporter. (309 aa)    
Predicted Functional Partners:
Arad_4761
Sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
  0.982
rbsA
Sugar ABC transporter; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
  0.970
rbsCch4
Ribose ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
   0.793
Arad_7529
Sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
   0.777
Arad_9237
Ribose ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
   0.774
Arad_9795
Sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
   0.768
Arad_7465
Ribose ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
   0.747
Arad_7768
Ribose ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
   0.744
rbsCch1
Ribose ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
   0.741
Arad_0113
Sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
   0.729
Your Current Organism:
Agrobacterium radiobacter
NCBI taxonomy Id: 311403
Other names: A. radiobacter K84, Agrobacterium radiobacter K84, Agrobacterium radiobacter str. K84, Agrobacterium radiobacter strain K84, Agrobacterium rhizogenes K84, Agrobacterium tumefaciens K84, Rhizobium radiobacter K84
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