Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arad_0384 | Arad_7024 | Arad_0384 | Arad_7024 | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | 0.480 |
Arad_0384 | Arad_7965 | Arad_0384 | Arad_7965 | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | 0.598 |
Arad_0384 | Arad_8195 | Arad_0384 | Arad_8195 | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | 0.695 |
Arad_0384 | nocR | Arad_0384 | Arad_4797 | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | Nopaline catabolism transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | 0.758 |
Arad_2069 | Arad_7024 | Arad_2069 | Arad_7024 | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | 0.470 |
Arad_2069 | Arad_7236 | Arad_2069 | Arad_7236 | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | 0.510 |
Arad_2069 | Arad_7965 | Arad_2069 | Arad_7965 | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | 0.495 |
Arad_2069 | gbpR | Arad_2069 | Arad_3359 | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | 0.690 |
Arad_2069 | nocR | Arad_2069 | Arad_4797 | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | Nopaline catabolism transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | 0.683 |
Arad_7023 | Arad_7024 | Arad_7023 | Arad_7024 | Oxidoreductase protein. | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | 0.557 |
Arad_7024 | Arad_0384 | Arad_7024 | Arad_0384 | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | 0.480 |
Arad_7024 | Arad_2069 | Arad_7024 | Arad_2069 | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | 0.470 |
Arad_7024 | Arad_7023 | Arad_7024 | Arad_7023 | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | Oxidoreductase protein. | 0.557 |
Arad_7024 | Arad_7026 | Arad_7024 | Arad_7026 | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.470 |
Arad_7024 | Arad_7236 | Arad_7024 | Arad_7236 | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | 0.494 |
Arad_7024 | Arad_7378 | Arad_7024 | Arad_7378 | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | 0.553 |
Arad_7024 | Arad_7965 | Arad_7024 | Arad_7965 | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | 0.542 |
Arad_7024 | Arad_8195 | Arad_7024 | Arad_8195 | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | 0.570 |
Arad_7024 | gbpR | Arad_7024 | Arad_3359 | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | 0.464 |
Arad_7024 | nocR | Arad_7024 | Arad_4797 | Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | Nopaline catabolism transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. | 0.594 |
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