STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadB1-3enoyl-CoA hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family. (273 aa)    
Predicted Functional Partners:
hbdA
3-hydroxybutyryl-CoA dehydrogenase protein.
 
 0.819
Arad_7113
Indolepyruvate ferredoxin oxidoreductase chain alpha.
     
 0.809
hbdA-2
3-hydroxybutyryl-CoA dehydrogenase protein.
 
 0.805
Arad_7114
FAD-dependent oxidoreductase protein.
  
 
 0.786
Arad_9261
acyl-CoA dehydrogenase protein.
 
 0.754
phbAch
acetyl-CoA acetyltransferase (beta-ketothiolase) protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.710
fixL
Two-component sensor histidine kinase protein.
  
 
 0.710
Arad_4554
Thiolase protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.698
Arad_8591
Two-component sensor histidine kinase/response regulator hybrid protein.
  
 
 0.693
Arad_3335
Two-component sensor histidine kinase/response regulator hybrid protein.
   
 
 0.689
Your Current Organism:
Agrobacterium radiobacter
NCBI taxonomy Id: 311403
Other names: A. radiobacter K84, Agrobacterium radiobacter K84, Agrobacterium radiobacter str. K84, Agrobacterium radiobacter strain K84, Agrobacterium rhizogenes K84, Agrobacterium tumefaciens K84, Rhizobium radiobacter K84
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