STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arad_7181Two-component response regulator protein. (213 aa)    
Predicted Functional Partners:
Arad_7182
Serine/threonine kinase protein of two-component system.
 
 
 0.964
Arad_8258
Serine/threonine kinase protein of two-component system.
 
 
 0.801
Arad_9735
Two-component sensor histidine kinase/response regulator hybrid protein.
   
 0.723
fixL
Two-component sensor histidine kinase protein.
 
 
 
 0.688
Arad_7180
Two-component response regulator protein.
 
    
0.685
Arad_3335
Two-component sensor histidine kinase/response regulator hybrid protein.
 
 
 
 0.578
Arad_8591
Two-component sensor histidine kinase/response regulator hybrid protein.
   
 
 0.568
cheRf-2
Chemotaxis methyltransferase protein.
 
 
 
 0.481
dctB
Two-component sensor histidine kinase protein regulating C4-dicarboxylate transport system.
 
 
 0.473
Arad_7649
Two-component sensor histidine kinase protein; Member of the two-component regulatory system DctB/DctD involved in the transport of C4-dicarboxylates. DctB functions as a membrane-associated protein kinase that phosphorylates DctD in response to environmental signals.
 
 
 0.440
Your Current Organism:
Agrobacterium radiobacter
NCBI taxonomy Id: 311403
Other names: A. radiobacter K84, Agrobacterium radiobacter K84, Agrobacterium radiobacter str. K84, Agrobacterium radiobacter strain K84, Agrobacterium rhizogenes K84, Agrobacterium tumefaciens K84, Rhizobium radiobacter K84
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.