STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arad_7334Conserved hypothetical protein; Belongs to the UPF0337 (CsbD) family. (59 aa)    
Predicted Functional Partners:
Arad_3976
Conserved hypothetical protein.
  
  
 0.742
cheRf
Chemotaxis methyltransferase protein.
 
    0.669
Arad_7335
Conserved hypothetical protein.
       0.615
Arad_1421
Pilus assembly transmembrane protein.
  
  
 0.511
Arad_4262
Conserved hypothetical protein.
  
  
 0.511
Arad_7586
Conserved hypothetical protein.
  
  
 0.511
Arad_7936
Hypothetical protein.
  
  
 0.511
Arad_9621
Tagatose-1,6-bisphosphate aldolase.
   
  
 0.487
Arad_3500
Acetyltransferase protein.
  
    0.481
Arad_9849
Acetyltransferase protein.
  
    0.481
Your Current Organism:
Agrobacterium radiobacter
NCBI taxonomy Id: 311403
Other names: A. radiobacter K84, Agrobacterium radiobacter K84, Agrobacterium radiobacter str. K84, Agrobacterium radiobacter strain K84, Agrobacterium rhizogenes K84, Agrobacterium tumefaciens K84, Rhizobium radiobacter K84
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.