STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arad_7484Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. (301 aa)    
Predicted Functional Partners:
Arad_9866
Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.757
Arad_4303
Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.743
Arad_8027
Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.742
Arad_7485
Oxidoreductase protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.739
nocR
Nopaline catabolism transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.711
Arad_3524
Transcriptional regulator protein.
  
     0.707
Arad_0572
Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.687
Arad_3551
Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.679
Arad_8195
Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.664
oxyR-2
Hydrogen peroxide sensing transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.639
Your Current Organism:
Agrobacterium radiobacter
NCBI taxonomy Id: 311403
Other names: A. radiobacter K84, Agrobacterium radiobacter K84, Agrobacterium radiobacter str. K84, Agrobacterium radiobacter strain K84, Agrobacterium rhizogenes K84, Agrobacterium tumefaciens K84, Rhizobium radiobacter K84
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.