STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arad_7489Amino acid ABC transporter. (254 aa)    
Predicted Functional Partners:
Arad_7488
Amino acid ABC transporter.
 
 0.996
Arad_7487
Amino acid ABC transporter.
  0.995
Arad_7490
Amino acid ABC transporter.
 
   0.902
Arad_9297
Amino acid ABC transporter.
 
 
 0.830
Arad_7951
Amino acid ABC transporter.
  
   0.820
Arad_7310
Amino acid ABC transporter.
 
 
 0.819
Arad_7949
Amino acid ABC transporter.
  
   0.818
Arad_8890
Amino acid ABC transporter.
 
   0.816
Arad_8892
Amino acid ABC transporter.
 
   0.815
Arad_7962
Amino acid ABC transporter.
 
   0.814
Your Current Organism:
Agrobacterium radiobacter
NCBI taxonomy Id: 311403
Other names: A. radiobacter K84, Agrobacterium radiobacter K84, Agrobacterium radiobacter str. K84, Agrobacterium radiobacter strain K84, Agrobacterium rhizogenes K84, Agrobacterium tumefaciens K84, Rhizobium radiobacter K84
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.