STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arad_7702acyl-CoA dehydrogenase protein. (407 aa)    
Predicted Functional Partners:
ntaA-2
Nitrilotriacetate monooxygenase protein.
 
    0.809
Arad_7704
Monooxygenase protein.
 
    0.793
Arad_7700
Oxidoreductase protein; Belongs to the flavin oxidoreductase frp family.
 
   
 0.792
fadB2
enoyl-CoA hydratase protein.
  
 0.764
Arad_7703
Conserved hypothetical protein.
       0.752
Arad_7705
acyl-CoA dehydrogenase protein.
 
    
0.744
ssuD-4
Alkanesulfonate monooxygenase protein.
  
    0.741
Arad_7643
FMNH2-dependent monooxygenase protein.
  
     0.701
Arad_7684
Monooxygenase protein.
  
    0.665
etfAch
Electron-transport flavoprotein.
 
 
 0.645
Your Current Organism:
Agrobacterium radiobacter
NCBI taxonomy Id: 311403
Other names: A. radiobacter K84, Agrobacterium radiobacter K84, Agrobacterium radiobacter str. K84, Agrobacterium radiobacter strain K84, Agrobacterium rhizogenes K84, Agrobacterium tumefaciens K84, Rhizobium radiobacter K84
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