STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arad_8195Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family. (298 aa)    
Predicted Functional Partners:
Arad_9866
Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.717
Arad_4303
Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.714
oxyR
Hydrogen peroxide sensing transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.714
Arad_0384
Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.695
Arad_8101
Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.687
Arad_8027
Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.685
Arad_7484
Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.664
nocR
Nopaline catabolism transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.651
Arad_7410
Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.650
Arad_1031
Transcriptional regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.645
Your Current Organism:
Agrobacterium radiobacter
NCBI taxonomy Id: 311403
Other names: A. radiobacter K84, Agrobacterium radiobacter K84, Agrobacterium radiobacter str. K84, Agrobacterium radiobacter strain K84, Agrobacterium rhizogenes K84, Agrobacterium tumefaciens K84, Rhizobium radiobacter K84
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.